splicegrapher and bam file
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6.9 years ago
qudrat ▴ 100

Hello, I have installed splicegrapher but do not know which command to use to make splicegraph database. I have BAM file produced from TopHat.

RNA-Seq splicegrapher • 1.2k views
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http://splicegrapher.sourceforge.net/userguide.html

... The first step generates a putative transcript database

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