How to import both node and edge files into cytoscape from WGCNA?

Question

[niutster]

Hi,

I am a little new with cytoscape, I used exportNetworkToCytoscape command in WGCNA to export the network, the commands output cotaining nodes and edges files but in cytoscape ,only one file can be imported. do anybody know how can i import both files into cytoscape?

[chetana]

Are you using desktop version of Cytoscape? If so is it MAC or windows?

[niutster]

I use desktop version on windows.

[zhaoliang0302]

Have you solved this problem? I just meet it and I don't know how to deal with it

[Kevin Blighe]

Have you read the tutorial?; also, what have you actually tried?

Answer 1

[Kevin Blighe]

You should take a look at the tutorial written specifically for this by the WGCNA developers: Exporting a gene network to external visualization software

This question was also posted on Bioconductor, where one of the developers replied: WGCNA export to cytoscape.

Kevin