I am looking for a way that I can assign functions to a thousands of proteins in a Fasta file

Question

[201314918]

Hi guys. I have a fasta file with thousands of protein sequences. Now I have used blast to gather their functions. I am seeking an easy method that would allow me to describe each protein. Please help

[lieven.sterck]

simple question without an easy answer I'm afraid.

Can you elaborate a bit more on the question?

you already have a blast result and want to parse it? you're just looking for the best approach to assign (potential !!) function to proteins?

Answer 1

[h.mon]

Try some transcriptome / proteome annotation tool, see here and here for recommendations.