Convert Clustal format to Fasta format

Question

[ArusjakGevorgyan]

Hi everyone! I have 1400 files in clustal format and I need to convert them all to fasta format. Do someone know how I can do it? Or if it exist some tool that I can use? Can I do it on my terminal or I have to write a script? I will be very grateful for your help :)

Answer 1

[GenoMax]

Look into Emboss readseq or seqret utilities ( e.g. https://www.ebi.ac.uk/Tools/sfc/emboss_seqret/ ). You can install EMBOSS locally to run it on the command line.

[ArusjakGevorgyan]

Thank you very much. I will try it now :)