Biobase library in R

Question

[nazaninhoseinkhan]

Hi all,

I want to do t-test in R version 3.0.3 and I need library Biobase to do that. I get a warning message that package Biobase can not be installed on R vrsion 3.0.3.

How can I use this package? Is there any alternative to this package?

Thanks

Nazanin

[dago]

for future question about Bioconductor you might consider to ask to their help website:

https://support.bioconductor.org/

[biggg.marinebiologist]

in the name of allah hi to all,

I problem to use of libraries Biobase and GEOquery in R version 3.4.3. it showed: Error in library(Biobase) : there is no package called 'Biobase' for me.

thanks

[russhh]

You have to install bioconductor before you can use Biobase. source("https://bioconductor.org/biocLite.R"); biocLite(); library(Biobase)

[biggg.marinebiologist]

Thanks

I think solve my problem but I say install with "www" code at source("www.bioconductor.org/....) is false. The true is: "https://...... if not supported used: http://.....

Answer 1

[richard.deborja]

t.test should be part of the core R libraries (package:stats) and should not require biobase. What happens if you just type t.test at the R console? I also just tried installing "biobase" from Bioconductor with no issues and I'm on R v3.1.2. Did you follow the instructions listed on http://www.bioconductor.org/packages/release/bioc/html/Biobase.html?