FCS to TXT

Question

[sararselitsky]

Is there a way to convert FCS to TXT or CSV in R?

I found Gene Pattern and some older tools that require Windows XP, but was wondering if there was a way to do it in R.

Answer 1

[Ahill]

You can use the flowCore package. See vignette here for example usage. Use the read.FCS() function to read in a FCS file, then write.delim() or write.csv() to write out a .txt or .csv file.