Tools to do a linear or logistic regression of DEG

Question

[amy16]

Hi all, I have completed the DEG analysis following the new tuxedo pipeline and have ended up with a long list of genes/transcripts. I was thinking of doing a linear or logistic regression analysis on this list to get the best pick of the gene/ transcript that could be associated with the molecular response at the given condition. So, can you please suggest me some good tools available to do this?

Thanks

[arta]

You can use R.

Linear regression

Logistic regression

Answer 1

[Kritika]

You can use R for running logistic and linear analysis

[amy16]

Which package in R do you recommend that will be more suitable for this type of analysis?