Separate multiple motifs
0
0
Entering edit mode
6.8 years ago
bioinfo&me • 0

Is there any simple way to separate multiple motifs of a single product??? I have search motifs found in a single product now i have to separate those multiple motifs, but manually it takes a lot of time so if any one knows about any easy method then please tell me. For Example:- i have search motif at motif search tool with folowing sequences

[ MNTLNDSLTAFDPDIAALIDGELRRQESGLEMIASENYAPLAVM
        QAQGSVLTNKYAEGYPGRRYYGGCEFVDGVEQLAIDRVKALFGAEYANVQPHSGATAN
        AATMHALLNPGDTILGLSLAHGGHLTHGMRINFSGKLYHATAYEVSKEDYLVDMDAVA
        EAARTHRPKMIIAGWSAYPRQLDFARFRAIADEVDAVLMVDMAHFAGLVAAGVHPSPV
        PHAHVVTSTTHKTLGGPRGGIILCNDPAIAKKINSAVFPGQQGGPLEHVIAAKATAFK
        MAAQPEFAQRQQRCLDGARILAGRLTQPDVAERGIAVLTGGTDVHLVLVDLRDAELDG
        QQAEDRLAAVDITVNRNAVPFDPRPPMITSGLRIGTPALAARGFSHNDFRAVADLIAA
        ALTATNDDQLGPLRAQVQRLAARYPLYPELHRT ]

and a list of motifs are found in Prosite, NCBI CDD, and Pfam. I only want to extract motifs in which a common enzyme is found.

sequence • 1.0k views
ADD COMMENT
1
Entering edit mode

Please define "product"

Please define "motif"

Please define the relationship between "motif" and "enzyme"

Please edit the question to give a more clear description of what it is you are trying to achieve

ADD REPLY

Login before adding your answer.

Traffic: 2521 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6