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6.7 years ago
bikash2510
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30
Whenever I am trying to plot volcano plot in MATLAB the plot show zero unregulated data. I am taking two sample GEO- GSE73486.
Don't use MATLAB. User
R.And check this tutorial - Repel overlapping text labels in ggplot2
No I want to Use MATLAB, i had already used R but in MATLAB volcano plot are generated with more detailed. So any one having idea about MATLAB volcano plot than please suggest me.
Please provide a reproducible example with all the code used.
mavolcanoplot(dependentData, independentData, pvalues,... 'Labels', probesetIDs)![Volcano Plot
![1]So is this your final volcano plot?
Yes But it only showing down regulated.
In MATLAB we need to take Data X , Data Y and P Values, but i am cofused about the Data X and Y(which data should i take)
Hello, please do not add additional information as answers. Read posts under https://www.biostars.org/t/how-to/