gene_id in ENCODE dataset
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Entering edit mode
6.7 years ago
evocanres ▴ 40

Hi,

I have downloaded the RNA-seq dataset from https://www.encodeproject.org/experiments/ENCSR000CGV/ .

My objective is to look at the expression of few hundred genes in this dataset. However, I dont know how to convert the gene_id here to gene name.

I am not sure if I can use biomaRt package in R, because there is not gene_id in the listAttributes output.

Find Image here

Thanks

encode rna-seq RNA-Seq • 1.1k views
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