Finding partially methylated domains starting from Illumina 450K IDAT files

Question

[Pin.Bioinf]

Hello,

I have IDAT files from Illumina 450K, and I would like to find the PMDs (partially methylated domains) to further associate it to cpg density and tetranucleotide motifs.

I know methpipe can do it (for .fastq files) is there a way to do it with minfi package or another?

Thank you