Genome/Exome + RNASeq cohort
0
0
Entering edit mode
6.6 years ago
Nick ▴ 30

Does this exist? I'm looking for a substantial cohort with genomes or exomes AND rnaseq data for a number of individuals.

I know of the Mayo GWAS... but ideally, I'm looking for genome/exome data to come as either raw FASTQs that I can process on my own, or downloadable gvcfs or even vcfs. I'd like RNAseq data as raw fastqs or to have the gene list output of a differential expression analysis.

RNA-Seq genome exome gwas cohort • 1.1k views
ADD COMMENT
0
Entering edit mode

Does the tissue matter?

ADD REPLY
0
Entering edit mode

Blood or fibroblast would be ideal; but no, not really.

ADD REPLY
0
Entering edit mode

You could search the EGA, ENA, ArrayExpress, SRA, etc.

ADD REPLY

Login before adding your answer.

Traffic: 1913 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6