CWL: Is there a way to have a list of imported Record types as an input?

Question

[ionox0]

E.g.

requirements:
  - $import: ../resources/schema_defs/fastq_pair.cwl

inputs:
  fastq_pairs:
    type:
      type: array
      items:
        type: ../resources/schema_defs/fastq_pair.cwl#FastqPair

Answer 1

[Michael R. Crusoe]

Yes,

A full example: https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl/blob/886df9de6713e06228d2560c40f451155a196383/tools/InterProScan5.21-60.cwl#L38

And the relevant excerpt:

requirements:
  SchemaDefRequirement:
    types: 
      - $import: InterProScan-apps.yaml

inputs:
  applications:
    type: InterProScan-apps.yaml#apps[]?
    inputBinding:
      itemSeparator: ','
      prefix: --applications