download human mRNA

Question

[yueli7]

Hello,

I try to predict the targets of human miRNA.

Where can I download the human mRNA data?

Thanks in advance for great help!

Yue

[Kevin Blighe]

You want mRNA FASTA sequence?

[yueli7]

Kevin Blighe,

Thank you for your response.

Yes! I want the fasta sequence?

Thanks!

[Kevin Blighe]

In that case, please see the answers that have already been given. Genomax's answer, in particular, will give you the FASTA sequences of all coding and non-coding mRNA.

The answer by sacha appears to give the FASTA sequence of mirs themselves, which are also available in GENCODE.

Please up-vote and accept answers and comments that help.

Answer 1

[GenoMax]

From GENCODE. Look under the fasta sequence category.

Answer 2

[sacha]

http://www.mirbase.org/ftp.shtml