Entering edit mode
6.5 years ago
luyang1005
▴
20
Hi, community,
I am analyzing the shotgun metagenomics data. I have got the scaffolds from the assembly. And I have got the protein hits to Pfam database. Since some papers mentioned that use conserved protein to predict taxonomy, which could be more reliable. May I know how to get the conserved protein? Any software and database suggestion? Does anyone have some suggestions? Thanks in advance.
