difficulty in executing micropred

Question

[inayat45shaikh]

I am trying to run micropred for feature assessment from microRNA sequences, but getting following error

[inayat@gibhpc1 progs]$ perl microPred.pl seq.fasta
-microPred started...
-calculating features-------------
    -folding original sequences...
    -calculating miPred sequential and structural features...
perl: symbol lookup error: ./miPred/ViennaRNA-1.6.4/Perl/blib/arch/auto/RNA/RNA.so: undefined symbol: Perl_Gthr_key_ptr
    -calculating z-features...(this might take some time as 1,000 random sequences are generated for each original sequence)
perl: symbol lookup error: ./miPred/ViennaRNA-1.6.4/Perl/blib/arch/auto/RNA/RNA.so: undefined symbol: Perl_Gthr_key_ptr
    -calculating MFEI1, MFEI2, MFEI3, MFEI4..... 
    -calculating basepair-related features...
    -calculating RNAfold-related features...
    -calculating mfold-related features...
---------------------------
    -filtering all features...
java.io.FileNotFoundException: ../data/seq.fasta.zdata (No such file or directory)
    at java.io.FileInputStream.open0(Native Method)
    at java.io.FileInputStream.open(FileInputStream.java:195)
    at java.io.FileInputStream.<init>(FileInputStream.java:138)
    at java.io.FileInputStream.<init>(FileInputStream.java:93)
    at filter_all.main(filter_all.java:16)
    -formating features...
java.io.FileNotFoundException: ../data/selected.seq.fasta.-21.features (No such file or directory)
    at java.io.FileInputStream.open0(Native Method)
    at java.io.FileInputStream.open(FileInputStream.java:195)
    at java.io.FileInputStream.<init>(FileInputStream.java:138)
    at java.io.FileInputStream.<init>(FileInputStream.java:93)
    at format1.main(format1.java:12)
    -scaling features into [-1,+1]...
can't open file ../SVM/seq.fasta.formatted
    -predicting...
---------------------------------
-Results...
    -Prediction results are written to the file /data/seq.fasta.predict 
      (+1 indicates a pre-miRNA candidate, -1 indicates a negative candidate)
    -All features extracted are written to the file /data/all.seq.fasta.-48.features
    -Best 21 features used for the prediction are written to the file /data/selected.seq.fasta.-21.features
-microPred completed successfully...
----------------------------------