Entering edit mode
6.5 years ago
cleb
▴
70
How can I extend the below query to also retrieve the stoichiometric factors of all reagents for the given rhea reaction? I see the scheme (slide 12) but I am not quite sure how to access the factors. I currently have:
PREFIX rh:<http://rdf.rhea-db.org/>
SELECT ?reaction ?reactionEquation ?rea_side ?partic ?compi ?chebi_id
WHERE {
?reaction rdfs:subClassOf rh:Reaction .
?reaction rh:equation ?reactionEquation .
?reaction rh:side ?rea_side .
?rea_side rh:contains ?partic .
?partic rh:compound ?compi .
?compi rh:name ?name .
?compi rh:chebi ?chebi_id .
FILTER (?reaction=rh:11932)
}
In addition, is there a way to also retrieve the charge information of the compound?