Question

PANTHER vs WebGestalt

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7.6 years ago

sanathoi ▴ 10

Hello, which one is more reliable while dealing with Over representation Analysis of NGS/ MicroArray data? I was checking these two database with same query data and i got drastic difference in the results. Any suggestion regarding ORA is most welcome.

enrichment pathway enrichment • 1.4k views

ADD COMMENT • link updated 6.5 years ago by BIOTECH.DEEPTI911 ▴ 10 • written 7.6 years ago by sanathoi ▴ 10

score 0 · Answer 1 · 2018-06-13

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6.5 years ago

BIOTECH.DEEPTI911 ▴ 10

Hi Sanathoi, I am also dealing with the same NGS data. You can use BinGO, a cytoscape plugin which is very useful as you can visualize the data. WenGestalt is more easy to use.

ADD COMMENT • link 6.5 years ago by BIOTECH.DEEPTI911 ▴ 10