how to download from IEDB with "host" information?
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6.5 years ago
walker ▴ 30

Hi, From IEDB, I want to download all the linear epitope , and then sort them based on the host type.However, I can't find any information about host in the CSV file I download from IEDB. Therefore, could anyone tell me how to get this "host type" information from IEDB?

IEDB • 1.1k views
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Is parent organism in column N equivalent to host?

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I believe not. For in the parent organism column, I find "Vaccinia virus" , "Influenza A virus" and more I believed not host name.

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6.5 years ago
GenoMax 148k

It looks like you have to export data from search tabs individually. When I click on Assays tab (and then appropriate sub tab, t-cell, b-cell) and export data from there, the host information is included in column AH.

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This works.Thanks for your reply!

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