Mauve export similarity
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6.3 years ago
firestar ★ 1.6k

I am using Mauve multiple genome alignment tool v20150226 to align two fasta files. The GUI displays a line graph.

enter image description here

I think the line graph denotes a measure of similarity of that region in one sequence to the other. Is there some way to export this similarity measure as a text file? I would like to modify it and import that into IGV as a bedGraph.
multiple-sequence-alignment mauve • 1.4k views
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Mauve should have given you an XMFA file of the alignment I think?

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