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6.3 years ago
sanamo5
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Can anyone suggest me from where I can download the data of Brain tumor? and Normal genome of Brain also.?
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Hello sanamo5,
your question lacks details. What kind of data do you need (WGS, Exome, Expression)? Please also read and follow this tutorial on How To Ask Good Questions On Technical And Scientific Forums
You can find some data on NCBI (https://www.ncbi.nlm.nih.gov/sra/?term=brain+tumor+homo+sapiens ), whole genome, exome...
Normal genome of brain ? You mean control patient ?
Take an ID project and look for brain tumor and associated normal patient
Actually I want WGS data ?
Yes I want this Normal genome of brain ? I mean control patient? and from where I can get case patient of Brain tumor?
On my link you have some
Thanks for your suggestion I got the link. Actually I want to do GWAS on Brain tumor so i have to compare control to case patient. So from this link i will get case patient and from where i can get control patient data and one thing more this the first step of GWAS. Am i right?
Without being an expert in GWAS, but doesn't it require hundreds of samples to be statistically meaningful? Also, please use the comment button instead of adding comments as answers.
Depends of the tumor, if it's a solid one you can go for the associated blood I guess. I never did pangenomics, some litterature will be your best weapon.