tools for Microsatellite Instability Identification
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6.3 years ago
genya35 ▴ 50

Hello,

Could someone please suggest free tools that can be used on single-end reads amplicon based ngs data for Microsatellite Instability Identification.

Thank you
next-gen • 1.6k views
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I am assuming you looked at MSI Sensor? https://github.com/ding-lab/msisensor

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yes, but it's not working well with IonTorrent single-end targeted data. Thanks

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