Algorithm for initial tree topology for Parsimony tree
0
0
Entering edit mode
6.2 years ago
mdsiddra ▴ 30

I have been using MEGA software for reconstructing parsimony tree using nucleotide and amino acid sequence files. The software gives different options for 'MP search methods' which are applied on initial tree topology and a tree with minimum number of evolutionary changes is resulted, but on which basis the initial topology is reconstructed? What is the model or formula used for generating a character state matrix which leads to an initial tree reconstruction?

phylogenetics • 1.0k views
ADD COMMENT

Login before adding your answer.

Traffic: 1686 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6