extract gseaResult in clusterprofiler
1
1
Entering edit mode
6.2 years ago
sugus ▴ 150

Hi there,

My question is how to extract informtation of a specific pathway from gseaResult object derived from GSEA() in clusterProfiler R package.

Basicly, I can just use gesaplot to plot what I am interested in gseaResult, but I want to output a detailed information of this specific pathway. How to do that?

Please advise, Many thanks advanced.

clusterProfiler GSEA • 3.7k views
ADD COMMENT
2
Entering edit mode
6.2 years ago
Guangchuang Yu ★ 2.6k

as.data.frame to convert the object to data frame?

ADD COMMENT

Login before adding your answer.

Traffic: 1942 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6