Regulatory network with python and R

Question

[The Bright Star]

Hi All, I am a beginner and I would highly appreciate if you tell me How to build regulatory network with python ? thanks in advance

[Michael]

This question doesn't make much sense to me unless it is prone to trivial answers, please elaborate on available data, analysis, and what you have tried.

Answer 1

[Bioaln]

Hello, Given very sparse definition, it seems you are trying to simply constructy a network object, useful for further analysis.

1. Obtain edges between genes based on expression
2. Compute properties of the network

The first step is an active research area. I would suggest you look at: https://bioconductor.org/packages/release/bioc/html/GeneNetworkBuilder.html for starters.

The second step highly depends on what you are trying to achieve. Please describe that in a bit more detail.

[The Bright Star]

Many thanks

[Bioaln]

If this helped, please mark the question as answered.