Entering edit mode
6.0 years ago
johnnytam100
▴
110
I would like to extract the sequence names of a certain node of a phylogenetic tree built in MEGA.
Since there are quite a lot of sequence of the node (up to thousand), is there a method to extract the sequence names by specifying a node either using the newick format or MEGA?
Thanks!
It won't be super simple, but you can access nodes and their descendents in the object model of
ETE3
andDendropy
. You would need to know the node ID ahead of time though I think.