Ensembl variation ancestral allele data

Question

[Scott]

Hi. I am looking to download ancestral allele data for human. Ensembl has a link on their FTP page (http://useast.ensembl.org/info/data/ftp/index.html) under comparative genomics called "Ancestral Alleles" but it appears to be dead. I would be interested in knowing if these files are still there and in a description of the data. Thanks.

[Pierre Lindenbaum]

do you want what is under: http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/phase1/analysis_results/supporting/ancestral_alignments/ ?

[Scott]

This would be okay, but I really need hg38. Ensembl has this in various formats, but if the files in question are FASTA files, it would be very convenient. Thanks!

[GenoMax]

Tagging: Emily_Ensembl

Answer 1

[Emily]

I'm not sure why that has been disabled in the current version, but you can get it in an archive.