Nextera Rapid Capture Exome Regions hg38

Question

[maduh17]

Hi everyone,

Has anyone worked with Nextera Rapid Capture WES on hg38 assembly?

Illumina has only hg19 targeted regions as a bed file on their website.

I'm wondering anyone has a lifted-over file and thoroughly checked it's all fine.

Many thanks.

Mamduh

[meizi2015]

Hi, did you find the hg38 exome targeted regions?

[colindaven]

Can't you do a liftover/convert between versions, for example on the Ensembl site ?

[meizi2015]

I can do convert to hg38 only if there is GRch38, but i only find GRCh37/hg19.