Colouring nodes with two different colours to compare the p-value
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5.9 years ago
barlu1432 ▴ 10

Hi all

I am new to bioinformatics and I am learning cytoscape for my data visualization. I have done gene enrichment analysis using g:profiler and added the output into cytoscape using map enrichment plugin. It gave a good network something like this https://drive.google.com/file/d/1-L9-mFTtM4bReuNskgCQTQ3mDiHex0R7/view?usp=sharing

I want to compare the p-value at 16 and 24 hours for same node (SOMETHING LIKE THIS https://goo.gl/images/q6puyq); however, there is no option in to select both hours in fill-option. how to set two values for one node?

Can you guide me with this silly problem? I have shared the cytoscape file for your view. https://drive.google.com/file/d/1-zcyiHLwu1Jg43qFJNXJoBUdRGHsiVL7/view?usp=sharing

Thanks Regards, Krishna

https://www.biorxiv.org/content/biorxiv/early/2017/12/12/232835.full.pdf

nodes visualization gene enrichment analysis • 921 views
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Take a look at the answers here: Coloring Multiple Nodes In Cytoscape

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