Entering edit mode
5.7 years ago
skjobs
▴
190
I'm trying to download the STAD tissue RNA-Seq read count of individual patients. I didn't find any link / source to directly download the tissue specific data
Example
P_ID P1 P2 P3 Pn..
Gene1/trns 12.0 5.0 0 ....n
Gene2 /trans 7.0 50.0 15.0 ....
Gene3/trans 0.00 10.0 12.0 ....
I want to download the STAD normal tissue in this format.
Do you want to download the TCGA data or something else...?
It's not the TCGA data, It's something else. It's GTEx data has only normal tissue expression. In TCGA there are very few number of normal samples. In GTEx has larger number of normal as compare to TCGA.