Strand-Specific Rna-Seq Data For Maqc Samples?

Question

[Tianyang Li]

Hi,

Is there publicly available strand-specific RNA-Seq data for the MAQC samples?

It seems that there are people who have done this (http://www.nugeninc.com/nugen/index.cfm/products/cs/ngs/encore-complete-rna-seq-library-systems/), but I don't know if there are publicly available data that I can download.

Thanks!

Answer 1

[Shaojiang Cai]

NCBI has such a library. Check this: http://www.ncbi.nlm.nih.gov/sra/SRX040571

[Tianyang Li]

It doesn't seem to be the MAQC samples.

Answer 2

[sergisayolspuig]

In case anybody lands here, MAQC data is described in all these publications.

Specifically, this is the MAQC-III the study describing the RNA-seq data, and the rawdata is in GEO's GSE47792.