Entering edit mode
5.8 years ago
charlesgwellem
▴
10
Is there are possibilty in Seurat to visualise the percentage distributions of cells treated under a particular condition per cluster? For example I wish to be able to produce a figure where I say: X% of cells treated with Y condition were located in cluster C and so forth?
I have tried:
number_perCluster<- table(object@meta.data$conditions,
object@meta.data$clusterID)
Which gives me the number of cells per condition and per cluster which I am not able to show here because the structure of the data will be altered and confusing.
I will be very grateful on any hint on how I can proceed to make a comprehensive figure.
Thank you in advance.
try