Entering edit mode
5.8 years ago
Vasu
▴
790
Hello,
With my dataset 88 tumor and 70 normal samples with 30k protein coding genes and lncRNAs. I have used WGCNA for co-expression network construction.
With WGCNA, I got 30 modules. It looks like below:
I'm interested in brown module and how I can get correlation coefficient value of all the genes and lncRNAs present in that module?
Any help is appreciated.
can anyone tell me how I can get the correlation coefficient and corresponding pvalues for each gene pair (lncRNA and mRNA) with WGCNA?
have you found the solution?