Identify K value from ADMIXTURE cross-validation result
1
0
Entering edit mode
5.8 years ago
BioRyder ▴ 220

Hello , I ran ADMIXTURE software ( population structure) with cross-validation test and got the following result. From this result which value I should use for K (3 or 4)?

https://wcmq.box.com/s/nw284b0n80a5cji5i3jjb4u3cywzxxno

Pop : Std.error
(K=1) : 0.4946
(K=2) : 0.46638
(K=3) : 0.45423
(K=4) : 0.45242
(K=5) : 0.45216
(K=6) : 0.4522
(K=7) : 0.45622
(K=8) : 0.46228

ADMIXTURE K value Population structure • 2.8k views
ADD COMMENT
1
Entering edit mode
5.8 years ago
Tm ★ 1.1k

According to me you can consider k=4:0.45242.

ADD COMMENT

Login before adding your answer.

Traffic: 2674 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6