VCF Format in 1000 Genome
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Entering edit mode
5.8 years ago

I am working with 1000 Genome VCF files, it has a format like this :

CHROM - POS - ID - REF - ALT - QUAL - FILTER - INFO - FORMAT - SAMPLE

SAMPLE column is like this : HG00117 - HG00215 - ...

I can't understand what is this column.

can anyone help me, please?

Thanks

snp SNP • 1.2k views
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3
Entering edit mode
5.8 years ago

can anyone help me, please?

sure: https://samtools.github.io/hts-specs/VCFv4.2.pdf

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