How to understand data in custom track of ucsc genome browsers
0
0
Entering edit mode
5.8 years ago
Kash ▴ 110

Hi everyone,

I am looking at these custom tracks for whole genome sequence of a zebra on ucsc genome browser. It is mapped against horse reference genome. To my understanding the red track is the forward strand of zebra and blue track is the reverse strand of zebra. I want to get the paired end reads for a specific region, which I know the coordinates. I can right click on the track and get the DNA sequence. Can someone please tell me is it correct if I save the sequence from the red track as R1.fasta and the sequence from the blue track as R2 fasta.

genome sequence UCSC genome browser custom track • 1.0k views
ADD COMMENT

Login before adding your answer.

Traffic: 1666 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6