Entering edit mode
5.8 years ago
I am running a bash code on Linux machine:
svr_psiblast_search < pilon_output.pilon.fasta > results.tab
and get:
s500 Error detected by service. at /usr/lib/myrast/lib/ClientThing.pm line 686
ClientThing::_send_request('ATserver=HASH(0x2d29c38)', 'function', 'psiblast_search', 'args', '---\x{a}db: SEED\x{a}profile:\x{a} -\x{a} - AL123456.3_pilon\x{a} - \'\'\x{a} ...', 'source', 'ClientThing', 'dbName', undef, ...) called at /usr/lib/myrast/lib/ClientThing.pm line 471
ClientThing::_call_method('ATserver=HASH(0x2d29c38)', 'psiblast_search', 'HASH(0x1d488a8)') called at /usr/lib/myrast/lib/ClientThing.pm line 243
ClientThing::AUTOLOAD('ATserver=HASH(0x2d29c38)', 'HASH(0x1d488a8)') called at /usr/lib/myrast/plbin/svr_psiblast_search.pl line 317
How to fix that? What SVR functions can annotate a FASTA input file?