Annovar Output Interpretation
0
0
Entering edit mode
5.7 years ago

I'd like to ask a question. All of my variants that undergo the WES, was completely annotated in Annovar. however, some of the variants were denoted as a dot (.) and "Unknown" for the Exonic Function RefGene and Exonic FunctionKnownGene, while the other variants were annotated as frameshift, synonymous etc.

so, what does that mean for both dot (.) and "Unknown"? thanks in advance!

genome sequence • 1.0k views
ADD COMMENT
0
Entering edit mode

Please give an example of your output, my guess is that the variants are not exonic.

ADD REPLY

Login before adding your answer.

Traffic: 1976 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6