the best and user-friendly tools for blast peptides

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5.7 years ago

alirezaei3333 • 0

I have many cysteine-rich peptides. I aim to blast them. I need a program and online tools to blast. Which tools and programs are suggested?

alignment sequencing protein • 1.4k views

ADD COMMENT • link updated 5.7 years ago by ATpoint 85k • written 5.7 years ago by alirezaei3333 • 0

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You can't/don't want to use blast+? Or do you think the repeats are going to be masked by blast? They should not be at NCBI web blast by default.

ADD REPLY • link 5.7 years ago by GenoMax 147k

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i dont familiar with any blast. its the first time which i should use this tools. can you guide me accurate and easy?

ADD REPLY • link 5.7 years ago by alirezaei3333 • 0

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Visit NCBI Web Blast page. Follow the prompts (those should be easy enough to understand). If you need help check this page.

ADD REPLY • link 5.7 years ago by GenoMax 147k

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Paste all your sequences in to the BLASTP webpage. Hit submit. It doesn't get any easier than that. If you have some specific questions, come back to us.

ADD REPLY • link 5.7 years ago by Joe 21k

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its not possible because of big data

ADD REPLY • link 5.7 years ago by alirezaei3333 • 0

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You need a local install in that case.

ADD REPLY • link 5.7 years ago by Joe 21k

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