How to predict SOX11 binding regions without ChIP-seq data

Question

[Shicheng Guo]

Hi All,

SOX11 is a transcriptional factor and I didn't find the ChIP-seq for this TF. Is there any way to predict which regions are binding with SOX11 without ChIP-seq data.

Thanks.

Answer 1

[ATpoint]

Transcription Factor Binding Site Prediction

Trascription factor binding site prediction

Transcription Factor Binding Sites

There is also Sox11 ChIP-seq data in GRANTA519 (B cell lymphoma cell line).

[Shicheng Guo]

DONE! THE LAST DATASET MAKE THE THINGS PERFECT. THANKS @ATpoint.