Entering edit mode
6.0 years ago
Hello, I'm working with the SnpStats package (software R) and with genotypes in the SnpMatrix format. I have in the rows my samples and in the columns the name of the SNPs. I also have another file with the SNPs Map (Name of SNP, Chromosome and Position). I need to separate the SnpMatrix (genotypes) into each chromosome (I have 29 chromosomes). Could anyone help? Thank you!
https://stackoverflow.com/q/53771148/680068
The link is dead. Am too looking for help with snpmatrix.
The link was the exact same question posted at StackOverflow by the same user, simply wanted to keep both connected. But now, yes, it is dead because post is deleted.