Entering edit mode
5.7 years ago
John
▴
270
Hey there,
How can I cluster the heat map using ggplot2? I know already ggplot2 doesn't contain clustering, but is there any way to do that?
and which is the best and easy package to plot heatmap in R? (should have color key, clustering)
From @Kevin: A: How can I generate Heat Map with dendograms, and PCA analysis in "R Programming"
I used
heatmap2
with good outcomes. I think this is the actual tutorial I used:https://combine-australia.github.io/RNAseq-R/06-rnaseq-day1.html