Haploview Skipping block output: no valid blocks error

Question

[shinken123]

Hi all,

I am runnig haploview https://www.broadinstitute.org/haploview/haploview

and I am having the next output:

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Haploview 4.2 Java Version: 1.8.0_201

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Arguments: -nogui -pedfile ../Plink_chr2_recoded.plk.ped -minMAF 0.05 -out SPIValues_2 -blockoutput SPI

Minimum MAF = 0.05 Using data file: ../Plink_chr2_recoded.plk.ped Using output fileroot: SPIValues_2 Writing output to SPIValues_2.SPINEblocks Skipping block output: no valid blocks.

Could someone please tell me why I am not obtaining any output?

Best Wishes,

Eric