Entering edit mode
5.5 years ago
Vasu
▴
790
I have seen many databases like TRANSFAC, HTRIdb, TRRUST etc..from where I can download information about TF-gene regulation in different cancer datasets.
But I'm interested in finding TF-gene regulation information specific to the samples I'm working with. I have ER+ samples of TCGA Breast cancer dataset. I would like to identify TF-gene regulation of only these samples. How to do that?
Any approaches or ideas for this? Any help is appreciated. thanq
Target genes of position-specific transcription factors
How Can I Find Target Genes Of A Transcription Factor?
Transcription Factors <--> Regulated Genes Database
Download Transcription Factor Targeting Genes Data