How to quantify mutations by type (e.g. A>T, T>A, G>C, ...) within reads mapping to genes
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5.5 years ago
gdeniz ▴ 20

Hi, I have RNA-seq data and would like to quantify the number of mutations and their type in reads mapping to genes probably normalized by gene size.

Is there a simple solution for this or a package you would recommend?

Thanks for your pointers!

RNA-Seq • 801 views
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