metabolites and the relevant pathways

Question

[rotemkat]

Hi, I have a list of metabolites, what would be the best way to map each metabolite to a pathway that is the most "meaningful"? in HMDB many the metabolites have multiple pathways in their page. Is there such table available?

Thanks.

Answer 1

[Kevin Blighe]

Hello,

You can use MetaboAnalyst: https://www.metaboanalyst.ca/

Specifically, MetaboAnalyst Pathway Analysis: https://www.metaboanalyst.ca/faces/upload/PathUploadView.xhtml

Kevin