GSM records without a corresponding SRA
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5.5 years ago
Sammy ▴ 30

Hey,

By your knowledge, is there possible for GSM records to not have a corresponding SRA page?

RNA-Seq • 1.1k views
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could be. GSM provides sample details, and it could be possible that there are only final processed files rather than the raw data. What is your specific concern?

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No, there are raw data available in the GSM. I am looking for RNA-seq from the 3rd party to process. Sometimes the SRP series is not as easy to find but I get it most of the times. The thing is that I upload the samples directly into Galaxy with the SRP. I don't really know what to do just with the GSM.

I mean with the GSM I can only download them and then align them?

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