Entering edit mode
5.5 years ago
biosol
▴
170
Hi everyone,
I'm trying to do a Manhattan plot with my GWAS SNPs for which I've calculated Bayes factor. I've seen that people usually transform p-values with -log10()
, but I would like to keep my Bayes factors untransformed. My problem is that I have values ranging from almost 0
to 10e^23
and I'm not able to adjust my y-axis label so that all my SNPs can be seen correctly,
I'm trying qqman
and CMplot
packages, but I think this is more a fact of the general ylim
function.
Could please anyone give advice about how I could arrange my data?
Thank you very much in advanced!