Entering edit mode
5.4 years ago
rimgubaev
▴
340
Hello everyone! I got filtered VCF file with SNPs produced by GATK and I want to make kinship matrix in SPAGeDi. I tried to format my VCF using NGSToolsApp but it produces file which seem to be truncated since I can't open it in gedit and SPAGeDi (I use version 1.3a available for linux) also produces an error. Are there any other programs to perform such formatting?
