Question

lncRNA-RNA interaction tool

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5.3 years ago

BioBaby ▴ 20

hi, is there any tool or software for predicting plant lncRNA-RNA interaction at large scale? I have seen lncTAR but it does not take whole RNA (35k not even 1k) at a time. can you people suggest me other tools for lncRNA and RNA interaction?

thanks

RNA-Seq • 1.2k views

ADD COMMENT • link 5.3 years ago by BioBaby ▴ 20

score 0 · Answer 1 · 2019-08-21

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5.3 years ago

jared.andrews07 ★ 18k

You might try PLAIDOH.

ADD COMMENT • link 5.3 years ago by jared.andrews07 ★ 18k

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thanks andrews, but it will work for novel lncRNA as it required identifier in input file?

ADD REPLY • link 5.3 years ago by BioBaby ▴ 20